The cheapest and fastest trains from San Diego, CA to Flagstaff, AZ
Cheapest price
$135
Average price
$157
Fastest journey
13 h 50 m
Average duration
13 h 50 m
Trains per day
2
Distance
578 km
The best way to find a cheap train ticket from San Diego, CA to Flagstaff, AZ is to book your journey as far in advance as possible and to avoid traveling at rush hour.
The average ticket from San Diego, CA to Flagstaff, AZ will cost around $157 if you buy it on the day, but the cheapest tickets can be found for only $135.
Of the 2 trains that leave San Diego, CA for Flagstaff, AZ on Wed, May 27, 2 travel direct so it’s quite easy to avoid journeys where you’ll have to change along the way.
On Wed, May 27 the direct trains cover the 578 km distance in an average of 13 h 50 m but if you time it right, some trains will get you there in just 13 h 50 m .
On Wed, May 27 the slowest trains will take 13 h 50 m and usually involve a change or two along the way, but you might be able to save a few pennies if you’re on a budget.
10:01 PM13h50San Diego, CA11:51 AMFlagstaff, AZ$1351One-way0 transfers
9:01 PM13h50San Diego, CA10:51 AMFlagstaff, AZ$1781One-way0 transfers
10:01 PM13h50San Diego, CA11:51 AMFlagstaff, AZ$1351One-way0 transfers
9:01 PM13h50San Diego, CA10:51 AMFlagstaff, AZ$1781One-way0 transfers
Travel Information
Compare train and bus for San Diego, CA to Flagstaff, AZ
Omio recommends booking the train as it is the most popular option from San Diego, CA to Flagstaff, AZ among Omio's users. If you are prioritising price take the train with prices starting from $103. For those with little time consider booking a train which can get you there in 12h 4m. The ticket price range depends on the travel mode: a train costs an average of $103, and a bus costs an average of $83.
Distance: 359 miles (578 km)
Compare train with
Most popular Train | Bus | Driving |
|---|---|---|
$129 Average price Cheapest | $139 Average price | $100 Average price (fuel + tolls) |
12h 34m Average total duration Fastest 12h 4m Onboard + 30m Additional time* | 14h 5m Average total duration 13h 35m Onboard + 30m Additional time* | 6h 50m Average total duration (door-to-door) |
![]() Most popular train company | ![]() Most popular bus company | Your own car or car rental |
Direct Options | Direct Options | Direct Options |
This is compared to other travel options from San Diego, CA to Flagstaff, AZ:
A train is $9 (€8) less than a bus for this route with tickets for a bus from San Diego, CA to Flagstaff, AZ costing on average $139 (€112).
Other travel options to Flagstaff, AZ take longer:
Bus takes on average 13h 35m.
Tickets start at around $129 (€104) compared to roughly $100 (€81) in fuel and tolls — a saving of about $-29.21 (€-23.57). The journey takes 12h 4m versus 6h 50m by car, so you'll arrive a bit later, but you can work, read, or sleep along the way rather than spending the time behind the wheel. You'll also save the hassle of parking at the other end.
Driving is worth it if you're on a tight schedule, travelling as a group, or want to stop somewhere en route.
Live departures
San Diego, CA to Flagstaff, AZ train times
The table below shows live departures for San Diego, CA to Flagstaff, AZ trains for today, Tuesday, May 26. You can also manually refresh the results below to see updated train journeys.
| Provider | Departs | Duration | Arrives | Transfers | Tickets |
|---|---|---|---|---|---|
![]() | 9:01 PM San Diego, CA | 13h50 | 10:51 AM Flagstaff, AZ | 0 transfersDirect | |
![]() | 10:01 PM San Diego, CA | 13h50 | 11:51 AM Flagstaff, AZ | 0 transfersDirect | |
This is the last train of the day. | |||||
Find all the dates and times for this journey
Compare prices and tickets San Diego, CA to Flagstaff, AZ by train or bus
Compare train and bus prices over the next three weeks. See the best deals at a glance, find the lowest fares, and choose the option that fits your budget.
May 27
May 28
May 29
May 30
May 31
Jun 01
Jun 02
Journey information
Overview: Train from San Diego, CA to Flagstaff, AZ
Trains from San Diego, CA to Flagstaff, AZ run on average 2 times per day, taking around 12h 4m. Cheap train tickets for this journey start at $103 (€83) but you can travel from only $83 (€67) by bus.
The earliest train runs at 14:01, the last at 21:15. The fastest train covers the 359 miles (578 km) distance in 13h 50m.
Distance 359 miles (578 km) |
Average train duration 12h 4m |
Cheapest ticket price $103 (€83) |
Trains per day 2 |
Fastest train 13h 50m |
First train 2:01 PM |
Last train 9:15 PM |
Cheapest Month Mar |
Cheapest Day Tue |
High Season Jan - Mar |
Low Season Jul - Sep |
Best time to book 4 days |
Train companies: Amtrak from San Diego, CA to Flagstaff, AZ trainsAmtrak trains will get you between San Diego, CA and Flagstaff, AZ from $83 (€67). With over 1000 travel companies on Omio, you can find the best train times and tickets for your trip.
Amtrak
FAQs: Trains from San Diego, CA to Flagstaff, AZ
Find answers to the most common questions about traveling from San Diego, CA to Flagstaff, AZ by train. From journey times and ticket prices to direct connections, first and last departures, and even whether the route is scenic, our FAQs cover everything you need to plan your trip. Whether you’re looking for the fastest train, the cheapest option, or tips for making the most of your visit at Flagstaff, AZ, this guide helps you travel smarter and with confidence.

popular train stations
Popular train stations from San Diego, CA to Flagstaff, AZ
- 5:00 AM - 10:00 PM Monday - Sunday
- Free
- Parking is available nearby with various public and private options.
- The Fish Market
- Karl Strauss Brewing Company
- Outside the main entrance.
- Ramps.
- $1.25
- The Westin San Diego
- The Guild Hotel, San Diego, a Tribute Portfolio Hotel
- Embassy Suites by Hilton San Diego Bay Downtown
- Located in the main hall
- Enterprise
- Hertz
- Located in the main hall
- Free
- Hall 1: main entrance, platforms for Amtrak and Coaster trains
- Hall 2: Trolley connections
- San Diego Trolley: Blue Line, Green Line
- Bus: Several lines available
- Amtrak: Pacific Surfliner
- 6:00 AM - 9:00 PM Monday - Sunday
- Free
- Parking is available with several spaces for commuters and visitors.
- Casa Guadalajara
- Old Town Mexican Cafe
- Outside the main entrance.
- Elevators, ramps.
- $0.25
- Old Town Inn
- Fairfield Inn & Suites by Marriott San Diego Old Town
- Best Western Plus Hacienda Hotel Old Town
- Located in the main hall
- Enterprise
- Hertz
- Located in the main hall
- Free
- Hall 1: main entrance, platforms for Amtrak and Coaster trains
- Hall 2: Trolley connections
- Trolley: Green Line
- Bus: Several lines available including 8, 9, 10, 28, 30, 35, 44, 88, 105, 150, 923, 928
- 8:00 AM - 5:00 PM Monday - Friday
- Closed on weekends
- Parking is available adjacent to the station, with access from Route 66.
- Beaver Street Brewery
- Pizzicletta
- Outside the main entrance.
- Ramps.
- $0.50
- Hotel Monte Vista
- Drury Inn & Suites Flagstaff
- Residence Inn by Marriott Flagstaff
- Located in the main hall
- Located in the main hall
- Free
- The station is a historic Santa Fe train depot, housing the Flagstaff Visitor Center.
- Bus: Mountain Line Route 10
- Shuttle services available
Most popular train connections from San Diego, CA
More options for your journey from San Diego, CA to Flagstaff, AZ
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